ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wjrA1 - ECOD Domain | ECOD

ECOD/Domains/e2wjrA1

e2wjrA1

UID: 001299083

PDB

Range: A:2-215
PDB: 2WJR chain A(all domains)
UniProt: P69856 (all domains)
Gene: nanC

Molecule: PROBABLE N-ACETYLNEURAMINIC ACID OUTER MEMBRANE CHANNEL PROTEIN NANC

3D Structure

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Related Domains

Browse other domains in KdgM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyKdgM(5084.5.1.8)

Ligands

in contact, ≤ 4 Å

N-octaneOCT

+ 2 additives (HEPES, Phosphate ion)

HEPESEPE
DrugBank DB16872
Phosphate ionPO4

Pfam Families

Oligogalacturonate-specific porin protein (KdgM)

ClanCL0193MBB

External Links

ECOD PDB View: 2WJR RCSB PDB: 2WJR PDBe: 2WJR UniProt: P69856

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.