ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o8pA1 - ECOD Domain | ECOD

ECOD/Domains/e4o8pA1

e4o8pA1

UID: 001299736

PDB

Range: A:61-363
PDB: 4O8P chain A(all domains)
UniProt: Q76BV4 (all domains)
Gene: stxIV

Molecule: Alpha-L-arabinofuranosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_62 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_62(5.1.2.6)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Potassium ionK
metal

+ 1 additive (3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL)

3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL

Pfam Families

PF03664Glyco_hydro_62

Glycosyl hydrolase family 62

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 4O8P RCSB PDB: 4O8P PDBe: 4O8P UniProt: Q76BV4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.