ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qfuB1 - ECOD Domain | ECOD

ECOD/Domains/e4qfuB1

e4qfuB1

UID: 001300207

PDB

Range: B:25-373
PDB: 4QFU chain B(all domains)
UniProt: A6L3N2 (all domains)
Gene: BVU_2644

Molecule: DUF4038 domain-containing protein

3D Structure

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Related Domains

Browse other domains in DUF4038 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDUF4038(2002.1.1.171)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive (Nitrate)

NitrateNO3

Pfam Families

PF13204Apiosidase

Apiosidase-like, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4QFU RCSB PDB: 4QFU PDBe: 4QFU UniProt: A6L3N2

Downloads

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DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.