ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ke1A1 - ECOD Domain | ECOD

ECOD/Domains/e4ke1A1

e4ke1A1

UID: 001303860

PDB

Range: A:-1-174
PDB: 4KE1 chain A(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-Secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

(12S)-12-[(1R)-2-{[(4S)-6-ethyl-3,4-dihydrospiro[chromene-2,1'-cyclobutan]-4-yl]amino}-1-hydroxyethyl]-1,13-diazatricyclo[13.3.1.1~6,10~]icosa-6(20),7,9,15(19),16-pentaene-14,18-dione1R6
Iodide ionIOD

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4KE1 RCSB PDB: 4KE1 PDBe: 4KE1 UniProt: P56817

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.