ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1od5B3 - ECOD Domain | ECOD

ECOD/Domains/e1od5B3

e1od5B3

UID: 001304548

PDB

Range: B:225-251,B:321-493
PDB: 1OD5 chain B(all domains)
UniProt: P04347 (all domains)
Gene: GY5

Molecule: GLYCININ

3D Structure

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Related Domains

Browse other domains in Cupin_1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_1(10.12.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00190Cupin_1

Cupin

ClanCL0029Cupin

External Links

ECOD PDB View: 1OD5 RCSB PDB: 1OD5 PDBe: 1OD5 UniProt: P04347

Downloads

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