ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yicC5 - ECOD Domain | ECOD

ECOD/Domains/e2yicC5

e2yicC5

UID: 001306689

PDB

Range: C:816-1075
PDB: 2YIC chain C(all domains)
UniProt: A0R2B1 (all domains)
Gene: kgd

Molecule: 2-OXOGLUTARATE DECARBOXYLASE

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2YIC RCSB PDB: 2YIC PDBe: 2YIC UniProt: A0R2B1

Downloads

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