ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ykvB2 - ECOD Domain | ECOD

ECOD/Domains/e2ykvB2

e2ykvB2

UID: 001306697

PDB

Range: B:16-335
PDB: 2YKV chain B(all domains)
UniProt: A3EYF7 (all domains)

Molecule: BETA-TRANSAMINASE

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

4'-Deoxy-4'-Acetylyamino-Pyridoxal-5'-PhosphateIK2
drugDrugBank DB02783

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2YKV RCSB PDB: 2YKV PDBe: 2YKV UniProt: A3EYF7

Downloads

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