ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3czpA2 - ECOD Domain | ECOD

ECOD/Domains/e3czpA2

e3czpA2

UID: 001307622

PDB

Range: A:255-496
PDB: 3CZP chain A(all domains)
UniProt: Q9HYF1 (all domains)
Gene: PA3455

Molecule: Putative polyphosphate kinase 2

3D Structure

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Related Domains

Browse other domains in PPK2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyPPK2(2004.1.1.109)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Glycerin, Malonate Ion, Acetate ion, …)

GlycerinGOL
DrugBank DB09462
Malonate IonMLI
DrugBank DB02201within 5 Å only

Pfam Families

Polyphosphate kinase 2 (PPK2)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3CZP RCSB PDB: 3CZP PDBe: 3CZP UniProt: Q9HYF1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Acetate ion

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.