ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ja4B1 - ECOD Domain | ECOD

ECOD/Domains/e4ja4B1

e4ja4B1

UID: 001308381

PDB

Range: B:260-479
PDB: 4JA4 chain B(all domains)
UniProt: P0AGF4 (all domains)
Gene: xylE

Molecule: D-xylose-proton symporter

3D Structure

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Related Domains

Browse other domains in Sugar_tr →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilySugar_tr(5050.1.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00083Sugar_tr

Sugar (and other) transporter

ClanCL0015MFS

External Links

ECOD PDB View: 4JA4 RCSB PDB: 4JA4 PDBe: 4JA4 UniProt: P0AGF4

Downloads

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