ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1wpoB1 - ECOD Domain | ECOD

ECOD/Domains/e1wpoB1

e1wpoB1

UID: 001309204

PDB

Range: B:10-135,B:155-256
PDB: 1WPO chain B(all domains)
UniProt: P16753 (all domains)
Gene: UL80

Molecule: HUMAN CYTOMEGALOVIRUS PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S21 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupHerpes virus serine proteinase, assemblin(50)

HH-groupHerpes virus serine proteinase, assemblin(50.1)

TT-groupHerpes virus serine proteinase, assemblin(50.1.1)

FFamilyPeptidase_S21(50.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00716Peptidase_S21

Assemblin (Peptidase family S21)

ClanCL0201Peptidase_SH

External Links

ECOD PDB View: 1WPO RCSB PDB: 1WPO PDBe: 1WPO UniProt: P16753

Downloads

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