ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wp8J3 - ECOD Domain | ECOD

ECOD/Domains/e2wp8J3

e2wp8J3

UID: 001309207

PDB

Range: J:252-399
PDB: 2WP8 chain J(all domains)
UniProt: Q08162 (all domains)
Gene: DIS3

Molecule: EXOSOME COMPLEX EXONUCLEASE DIS3

3D Structure

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Related Domains

Browse other domains in Rrp44_CSD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_CSD1(2.1.1.82)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17216Rrp44_CSD1

Rrp44-like cold shock domain

ClanCL0021OB

External Links

ECOD PDB View: 2WP8 RCSB PDB: 2WP8 PDBe: 2WP8 UniProt: Q08162

Downloads

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