ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wf2B2 - ECOD Domain | ECOD

ECOD/Domains/e3wf2B2

e3wf2B2

UID: 001309467

PDB

Range: B:396-530
PDB: 3WF2 chain B(all domains)
UniProt: P16278 (all domains)
Gene: GLB1

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in BetaGal_ABD_1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyBetaGal_ABD_1(10.32.1.73)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG
(2R,3S,4R,5S)-N-butyl-3,4,5-trihydroxy-2-(hydroxymethyl)piperidine-1-carbothioamideNDJ
within 5 Å only

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF21317BetaGal_ABD_1

Beta-galactosidase, first all-beta domain

ClanCL0202GBD

External Links

ECOD PDB View: 3WF2 RCSB PDB: 3WF2 PDBe: 3WF2 UniProt: P16278

Downloads

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DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.