ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vvbA1 - ECOD Domain | ECOD

ECOD/Domains/e3vvbA1

e3vvbA1

UID: 001311562

PDB

Range: A:2-168,A:193-239,A:260-285,A:305-334
PDB: 3VVB chain A(all domains)
UniProt: Q7A2Y4 (all domains)

Molecule: CapE

3D Structure

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Related Domains

Browse other domains in Polysacc_synt_2,Polysacc_syn_2C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPolysacc_synt_2,Polysacc_syn_2C(2003.1.1.35)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02719Polysacc_synt_2

Polysaccharide biosynthesis protein

ClanCL0063NADP_Rossmann

PF08485Polysacc_syn_2C

Polysaccharide biosynthesis protein C-terminal

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3VVB RCSB PDB: 3VVB PDBe: 3VVB UniProt: Q7A2Y4

Downloads

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