ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2ykvA1 - ECOD Domain | ECOD

ECOD/Domains/e2ykvA1

e2ykvA1

UID: 001311609

PDB

Range: A:13-334
PDB: 2YKV chain A(all domains)
UniProt: A3EYF7 (all domains)

Molecule: BETA-TRANSAMINASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

4'-Deoxy-4'-Acetylyamino-Pyridoxal-5'-PhosphateIK2
drugDrugBank DB02783

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2YKV RCSB PDB: 2YKV PDBe: 2YKV UniProt: A3EYF7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure