ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qpbB1 - ECOD Domain | ECOD

ECOD/Domains/e4qpbB1

e4qpbB1

UID: 001312122

PDB

Range: B:251-384
PDB: 4QPB chain B(all domains)
UniProt: P10547 (all domains)
Gene: lss

Molecule: Lysostaphin

3D Structure

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Related Domains

Browse other domains in Peptidase_M23 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupDuplicated hybrid motif(325.1.6)

FFamilyPeptidase_M23(325.1.6.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01551Peptidase_M23

Peptidase family M23

ClanCL0105Hybrid

External Links

ECOD PDB View: 4QPB RCSB PDB: 4QPB PDBe: 4QPB UniProt: P10547

Downloads

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