ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tniO1 - ECOD Domain | ECOD

ECOD/Domains/e4tniO1

e4tniO1

UID: 001312191

PDB

Range: O:30-272
PDB: 4TNI chain O(all domains)
UniProt: P0A431 (all domains)
Gene: psbO

Molecule: Photosystem II manganese-stabilizing polypeptide

3D Structure

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Related Domains

Browse other domains in MSP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPA-like(5084.1)

TT-groupOMPA-like(5084.1.1)

FFamilyMSP(5084.1.1.3)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
Calcium ionCA
metal
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

Pfam Families

Manganese-stabilising protein / photosystem II polypeptide

ClanCL0193MBB

External Links

ECOD PDB View: 4TNI RCSB PDB: 4TNI PDBe: 4TNI UniProt: P0A431

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.