ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tpgA1 - ECOD Domain | ECOD

ECOD/Domains/e4tpgA1

e4tpgA1

UID: 001312286

PDB

Range: A:232-492
PDB: 4TPG chain A(all domains)
UniProt: Q8EHE6 (all domains)
Gene: SO_1277

Molecule: Proton:oligopeptide symporter POT family

3D Structure

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Related Domains

Browse other domains in PTR2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilyPTR2(5050.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

POT family

ClanCL0015MFS

External Links

ECOD PDB View: 4TPG RCSB PDB: 4TPG PDBe: 4TPG UniProt: Q8EHE6

Downloads

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