ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f2bA1 - ECOD Domain | ECOD

ECOD/Domains/e3f2bA1

e3f2bA1

UID: 001312437

RepresentativePDB

Range: A:817-914,A:956-1102
PDB: 3F2B chain A(all domains)
UniProt: Q5L0J3 (all domains)
Gene: polC

Molecule: DNA-directed DNA polymerase III alpha chain

3D Structure

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Related Domains

Browse other domains in DNA_pol3_alpha →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDNA_pol3_alpha(316.1.1.17)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

PF07733DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 3F2B RCSB PDB: 3F2B PDBe: 3F2B UniProt: Q5L0J3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.