ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qhiD1 - ECOD Domain | ECOD

ECOD/Domains/e4qhiD1

e4qhiD1

UID: 001315101

PDB

Range: D:3-109
PDB: 4QHI chain D(all domains)
UniProt: Q58610 (all domains)
Gene: MJ1213

Molecule: Uncharacterized protein MJ1213

3D Structure

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Related Domains

Browse other domains in Peptidase_M56 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M56(2498.1.1.26)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05569Peptidase_M56

BlaR1 peptidase M56

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4QHI RCSB PDB: 4QHI PDBe: 4QHI UniProt: Q58610

Downloads

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