ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tq3B1 - ECOD Domain | ECOD

ECOD/Domains/e4tq3B1

e4tq3B1

UID: 001315107

PDB

Range: B:15-302
PDB: 4TQ3 chain B(all domains)
UniProt: O28625 (all domains)
Gene: AF_1648

Molecule: Prenyltransferase

3D Structure

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Related Domains

Browse other domains in UbiA →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyUbiA(141.1.1.3)

Ligands

in contact, ≤ 4 Å

Geranyl DiphosphateGPP
drugDrugBank DB02552
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UbiA prenyltransferase family

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 4TQ3 RCSB PDB: 4TQ3 PDBe: 4TQ3 UniProt: O28625

Downloads

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