ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p40A3 - ECOD Domain | ECOD

ECOD/Domains/e4p40A3

e4p40A3

UID: 001318657

PDB

Range: A:275-383
PDB: 4P40 chain A(all domains)
UniProt: Q9Z8L4 (all domains)
Gene: lcrE

Molecule: CopN

3D Structure

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Related Domains

Browse other domains in T3SS_CopN_3rd →

Classification

AArchitecturealpha arrays(a.6)

XX-groupType III secretion system domain-like(532)

HH-groupType III secretion system domains(532.2)

TT-groupType III secretion system domains(532.2.1)

FFamilyT3SS_CopN_3rd(532.2.1.5)

Ligands

in contact, ≤ 4 Å

FormaldehydeFOR
drugDrugBank DB03843
Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF22342T3SS_CopN_3rd

T3SS, Low calcium response E, third helical domain

External Links

ECOD PDB View: 4P40 RCSB PDB: 4P40 PDBe: 4P40 UniProt: Q9Z8L4

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.