ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cshB1 - ECOD Domain | ECOD

ECOD/Domains/e4cshB1

e4cshB1

UID: 001319735

PDB

Range: B:2-165
PDB: 4CSH chain B(all domains)
UniProt: Q6Y7T6 (all domains)
Gene: ORF30/ORF32

Molecule: LYSK

3D Structure

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Related Domains

Browse other domains in CHAP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCHAP(219.1.1.28)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal
Zinc ionZN

Pfam Families

CHAP domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4CSH RCSB PDB: 4CSH PDBe: 4CSH UniProt: Q6Y7T6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.