ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4knhB1 - ECOD Domain | ECOD

ECOD/Domains/e4knhB1

e4knhB1

UID: 001322387

PDB

Range: B:2-568,B:588-679,B:699-895,B:917-958
PDB: 4KNH chain B(all domains)
UniProt: G0ZGU6 (all domains)

Molecule: Nup192p

3D Structure

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Related Domains

Browse other domains in Nup192 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNup192(109.4.1.162)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

Nuclear pore complex scaffold, nucleoporins 186/192/205

ClanCL0020TPR

External Links

ECOD PDB View: 4KNH RCSB PDB: 4KNH PDBe: 4KNH UniProt: G0ZGU6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.