ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qdkB1 - ECOD Domain | ECOD

ECOD/Domains/e4qdkB1

e4qdkB1

UID: 001322635

PDB

Range: B:8-230
PDB: 4QDK chain B(all domains)
UniProt: Q55467 (all domains)
Gene: chlM

Molecule: Magnesium-protoporphyrin O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_25(2003.1.5.81)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4QDK RCSB PDB: 4QDK PDBe: 4QDK UniProt: Q55467

Downloads

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Drug annotations from DrugDomain.