ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r0jA1 - ECOD Domain | ECOD

ECOD/Domains/e4r0jA1

e4r0jA1

UID: 001323418

RepresentativePDB

Range: A:2-214
PDB: 4R0J chain A(all domains)
UniProt: Q8DSL7 (all domains)
Gene: SMU_1763c

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Cas_Cas5d →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR system Cas5 homologs(304.158)

TT-groupCRISPR system Cas5 homologs(304.158.1)

FFamilyCas_Cas5d(304.158.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09704Cas_Cas5d

CRISPR-associated protein (Cas_Cas5)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4R0J RCSB PDB: 4R0J PDBe: 4R0J UniProt: Q8DSL7

Downloads

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