ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p5eA1 - ECOD Domain | ECOD

ECOD/Domains/e4p5eA1

e4p5eA1

UID: 001323556

PDB

Range: A:20-162
PDB: 4P5E chain A(all domains)
UniProt: O43598 (all domains)
Gene: DNPH1

Molecule: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

6-(naphthalen-2-yl)-9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purineN6P

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4P5E RCSB PDB: 4P5E PDBe: 4P5E UniProt: O43598

Downloads

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