ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pknM1 - ECOD Domain | ECOD

ECOD/Domains/e4pknM1

e4pknM1

UID: 001323591

PDB

Range: M:2-136,M:410-525
PDB: 4PKN chain M(all domains)
UniProt: Q548M1 (all domains)
Gene: groL

Molecule: 60 kDa chaperonin

3D Structure

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Related Domains

Browse other domains in Cpn60_TCP1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupGroEL equatorial domain-like(593)

HH-groupGroEL equatorial domain-like(593.1)

TT-groupGroEL equatorial domain-like(593.1.1)

FFamilyCpn60_TCP1(593.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Beryllium trifluoride ionBEF
Potassium ionK

Pfam Families

PF00118Cpn60_TCP1

TCP-1/cpn60 chaperonin family

External Links

ECOD PDB View: 4PKN RCSB PDB: 4PKN PDBe: 4PKN UniProt: Q548M1

Downloads

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metal

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.