ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4pkoF1 - ECOD Domain | ECOD

ECOD/Domains/e4pkoF1

e4pkoF1

UID: 001323629

PDB

Range: F:2-136,F:410-525
PDB: 4PKO chain F(all domains)
UniProt: Q548M1 (all domains)
Gene: groL

Molecule: 60 kDa chaperonin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cpn60_TCP1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupGroEL equatorial domain-like(593)

HH-groupGroEL equatorial domain-like(593.1)

TT-groupGroEL equatorial domain-like(593.1.1)

FFamilyCpn60_TCP1(593.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Beryllium trifluoride ionBEF
Potassium ionK

Pfam Families

PF00118Cpn60_TCP1

TCP-1/cpn60 chaperonin family

External Links

ECOD PDB View: 4PKO RCSB PDB: 4PKO PDBe: 4PKO UniProt: Q548M1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.