ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4utrB2 - ECOD Domain | ECOD

ECOD/Domains/e4utrB2

e4utrB2

UID: 001324253

PDB

Range: B:140-200
PDB: 4UTR chain B(all domains)
UniProt: Q6DHI5 (all domains)
Gene: sirt5

Molecule: NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySIR2(375.1.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4UTR RCSB PDB: 4UTR PDBe: 4UTR UniProt: Q6DHI5

Downloads

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