ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ty0B1 - ECOD Domain | ECOD

ECOD/Domains/e4ty0B1

e4ty0B1

UID: 001325228

PDB

Range: B:271-411
PDB: 4TY0 chain B(all domains)
UniProt: Q9KVG7 (all domains)
Gene: dncV

Molecule: Cyclic AMP-GMP synthase

3D Structure

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Related Domains

Browse other domains in DncV_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyDncV_C(102.1.3.11)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid38V

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cyclic GMP-AMP synthase, C-terminal domain

External Links

ECOD PDB View: 4TY0 RCSB PDB: 4TY0 PDBe: 4TY0 UniProt: Q9KVG7

Downloads

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