ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ty0B2 - ECOD Domain | ECOD

ECOD/Domains/e4ty0B2

e4ty0B2

UID: 001325229

PDB

Range: B:5-205,B:243-270
PDB: 4TY0 chain B(all domains)
UniProt: Q9KVG7 (all domains)
Gene: dncV

Molecule: Cyclic AMP-GMP synthase

3D Structure

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Related Domains

Browse other domains in DncV-like_NTFase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDncV-like_NTFase(316.1.1.34)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid38V
Magnesium ionMG
metal

Shown in the structure viewer.

Pfam Families

PF21654DncV-like_NTFase

Cyclic GMP-AMP synthase DncV-like, nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4TY0 RCSB PDB: 4TY0 PDBe: 4TY0 UniProt: Q9KVG7

Downloads

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Drug annotations from DrugDomain.