ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qkdC1 - ECOD Domain | ECOD

ECOD/Domains/e4qkdC1

e4qkdC1

UID: 001325398

PDB

Range: C:16-206
PDB: 4QKD chain C(all domains)
UniProt: Q9BT30 (all domains)
Gene: ALKBH7

Molecule: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_2(10.12.1.51)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF135322OG-FeII_Oxy_2

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 4QKD RCSB PDB: 4QKD PDBe: 4QKD UniProt: Q9BT30

Downloads

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