ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1re5B1 - ECOD Domain | ECOD

ECOD/Domains/e1re5B1

e1re5B1

UID: 000133166

PDB

Range: B:105-350
PDB: 1RE5 chain B(all domains)
UniProt: Q88N37 (all domains)
Gene: pcaB

Molecule: 3-carboxy-cis,cis-muconate cycloisomerase

3D Structure

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Related Domains

Browse other domains in Lyase_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupL-aspartase middle domain-like(602)

HH-groupL-aspartase middle domain-like(602.1)

TT-groupL-aspartase middle domain-like(602.1.1)

FFamilyLyase_1(602.1.1.1)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer.

Pfam Families

PF00206Lyase_1

Lyase

External Links

ECOD PDB View: 1RE5 RCSB PDB: 1RE5 PDBe: 1RE5 UniProt: Q88N37

Downloads

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Drug annotations from DrugDomain.