ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kowC1 - ECOD Domain | ECOD

ECOD/Domains/e3kowC1

e3kowC1

UID: 001338041

PDB

Range: C:591-739
PDB: 3KOW chain C(all domains)
UniProt: E3PY95 (all domains)
Gene: oraE

Molecule: D-ornithine aminomutase E component

3D Structure

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Related Domains

Browse other domains in B12-binding →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyB12-binding(2007.1.3.4)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
CobalaminB12
5'-DEOXYADENOSINE5AD

Pfam Families

PF02310B12-binding

B12 binding domain

External Links

ECOD PDB View: 3KOW RCSB PDB: 3KOW PDBe: 3KOW UniProt: E3PY95

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.