ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dmiA1 - ECOD Domain | ECOD

ECOD/Domains/e3dmiA1

e3dmiA1

UID: 000134109

PDB

Range: A:46-132
PDB: 3DMI chain A(all domains)
UniProt: Q8GTB5 (all domains)
Gene: pet

Molecule: cytochrome c6

3D Structure

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Related Domains

Browse other domains in Cytochrome_CBB3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrome_CBB3(107.1.1.9)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317within 5 Å only
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13442Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 3DMI RCSB PDB: 3DMI PDBe: 3DMI UniProt: Q8GTB5

Downloads

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