ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r1lD3 - ECOD Domain | ECOD

ECOD/Domains/e4r1lD3

e4r1lD3

UID: 001346692

PDB

Range: D:322-434
PDB: 4R1L chain D(all domains)
UniProt: Q8AAN6 (all domains)
Gene: BT_0428

Molecule: Phenylacetate-coenzyme A ligase

3D Structure

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Related Domains

Browse other domains in AMP-binding_C_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C_2(327.5.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF14535AMP-binding_C_2

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 4R1L RCSB PDB: 4R1L PDBe: 4R1L UniProt: Q8AAN6

Downloads

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Drug annotations from DrugDomain.