ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pegA1 - ECOD Domain | ECOD

ECOD/Domains/e4pegA1

e4pegA1

UID: 001347548

RepresentativePDB

Range: A:5-267
PDB: 4PEG chain A(all domains)
UniProt: C4M1P9 (all domains)
Gene: DBR1

Molecule: RNA lariat debranching enzyme, putative

3D Structure

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Related Domains

Browse other domains in Metallophos →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyMetallophos(246.2.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972
MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

PF00149Metallophos

Calcineurin-like phosphoesterase

ClanCL0163Calcineurin

External Links

ECOD PDB View: 4PEG RCSB PDB: 4PEG PDBe: 4PEG UniProt: C4M1P9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.