ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mgzE1 - ECOD Domain | ECOD

ECOD/Domains/e4mgzE1

e4mgzE1

UID: 001347716

PDB

Range: E:443-616
PDB: 4MGZ chain E(all domains)
UniProt: Q9EQZ6 (all domains)
Gene: Rapgef4

Molecule: Rap guanine nucleotide exchange factor 4

3D Structure

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Related Domains

Browse other domains in RasGEF_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupRas GEF(109.6)

TT-groupRas GEF(109.6.1)

FFamilyRasGEF_N(109.6.1.3)

Ligands

in contact, ≤ 4 Å

(2S,4aR,6R,7R,7aS)-6-[6-amino-8-(benzylsulfanyl)-9H-purin-9-yl]-2-sulfanyltetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol 2-oxideHR6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00618RasGEF_N

RasGEF N-terminal motif

ClanCL0542RAS_GEF_N

External Links

ECOD PDB View: 4MGZ RCSB PDB: 4MGZ PDBe: 4MGZ UniProt: Q9EQZ6

Downloads

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