ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mh0E2 - ECOD Domain | ECOD

ECOD/Domains/e4mh0E2

e4mh0E2

UID: 001347722

PDB

Range: E:310-445
PDB: 4MH0 chain E(all domains)
UniProt: Q9EQZ6 (all domains)
Gene: Rapgef4

Molecule: Rap guanine nucleotide exchange factor 4

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Ligands

in contact, ≤ 4 Å

(2S,4aR,6R,7R,7aS)-6-{6-amino-8-[(4-fluorobenzyl)sulfanyl]-9H-purin-9-yl}-2-sulfanyltetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol 2-oxideHR4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4MH0 RCSB PDB: 4MH0 PDBe: 4MH0 UniProt: Q9EQZ6

Downloads

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