ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3h8uA1 - ECOD Domain | ECOD

ECOD/Domains/e3h8uA1

e3h8uA1

UID: 000134819

PDB

Range: A:3-124
PDB: 3H8U chain A(all domains)
UniProt: A6TJ50 (all domains)
Gene: KPN_pKPN5p08243

Molecule: uncharacterized conserved protein with double-stranded beta-helix domain

3D Structure

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Related Domains

Browse other domains in Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_2(10.12.1.39)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Glycerin)

Sulfate ionSO4
DrugBank DB14546
GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer.

Pfam Families

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 3H8U RCSB PDB: 3H8U PDBe: 3H8U UniProt: A6TJ50

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.