ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tydM1 - ECOD Domain | ECOD

ECOD/Domains/e4tydM1

e4tydM1

UID: 001349142

PDB

Range: M:1-180
PDB: 4TYD chain M(all domains)
UniProt: Q0ZNA6 (all domains)

Molecule: NS3 protease

3D Structure

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Related Domains

Browse other domains in Peptidase_S29 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S29(1.1.5.14)

Ligands

in contact, ≤ 4 Å

(4R,6S,7Z,15S,17S)-17-[({7-methoxy-2-[4-(propan-2-yl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)methyl]-13-methyl-N-[(1-methylcyclopropyl)sulfonyl]-2,14-dioxo-1,3,13-triazatricyclo[13.2.0.0~4,6~]heptadec-7-ene-4-carboxamide3EO
Chloride ionCL
Zinc ionZN

Pfam Families

PF02907Peptidase_S29

Hepatitis C virus NS3 protease

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4TYD RCSB PDB: 4TYD PDBe: 4TYD UniProt: Q0ZNA6

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.