ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1l9mA6 - ECOD Domain | ECOD

ECOD/Domains/e1l9mA6

e1l9mA6

UID: 001349399

RepresentativePDB

Range: A:479-593
PDB: 1L9M chain A(all domains)
UniProt: Q08188 (all domains)
Gene: TGM3

Molecule: Protein-glutamine glutamyltransferase E3

3D Structure

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Related Domains

Browse other domains in Transglut_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTransglut_C(11.1.1.17)

Ligands

in contact, ≤ 4 Å

Bromide ionBR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00927Transglut_C

Transglutaminase family, C-terminal ig like domain

ClanCL0159E-set

External Links

ECOD PDB View: 1L9M RCSB PDB: 1L9M PDBe: 1L9M UniProt: Q08188

Downloads

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