ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qblA1 - ECOD Domain | ECOD

ECOD/Domains/e4qblA1

e4qblA1

UID: 001349404

RepresentativePDB

Range: A:5-144
PDB: 4QBL chain A(all domains)
UniProt: A5WF35 (all domains)
Gene: PsycPRwf_1331

Molecule: VRR-NUC

3D Structure

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Related Domains

Browse other domains in VRR_NUC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyVRR_NUC(2008.1.1.31)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08774VRR_NUC

VRR-NUC domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 4QBL RCSB PDB: 4QBL PDBe: 4QBL UniProt: A5WF35

Downloads

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