ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3h5qA3 - ECOD Domain | ECOD

ECOD/Domains/e3h5qA3

e3h5qA3

UID: 000134981

PDB

Range: A:71-330
PDB: 3H5Q chain A(all domains)
UniProt: Q5HE64 (all domains)
Gene: pdp

Molecule: Pyrimidine-nucleoside phosphorylase

3D Structure

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Related Domains

Browse other domains in Glycos_transf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544)

HH-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544.1)

TT-groupNucleoside phosphorylase/phosphoribosyltransferase catalytic domain(7544.1.1)

FFamilyGlycos_transf_3(7544.1.1.1)

Ligands

in contact, ≤ 4 Å

ThymidineTHM
drugDrugBank DB04485

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00591Glycos_transf_3

Glycosyl transferase family, a/b domain

External Links

ECOD PDB View: 3H5Q RCSB PDB: 3H5Q PDBe: 3H5Q UniProt: Q5HE64

Downloads

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Drug annotations from DrugDomain.