ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4u0mA2 - ECOD Domain | ECOD

ECOD/Domains/e4u0mA2

e4u0mA2

UID: 001349811

PDB

Range: A:3-215,A:238-275
PDB: 4U0M chain A(all domains)
UniProt: Q9KVG7 (all domains)
Gene: dncV

Molecule: Cyclic AMP-GMP synthase

3D Structure

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Related Domains

Browse other domains in DncV-like_NTFase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDncV-like_NTFase(316.1.1.34)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ion

Pfam Families

PF21654DncV-like_NTFase

Cyclic GMP-AMP synthase DncV-like, nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4U0M RCSB PDB: 4U0M PDBe: 4U0M UniProt: Q9KVG7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

N-[4-({[(6S)-2-amino-5-methyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-gamma-glutamyl-L-glutamic acidTLL

Shown in the structure viewer. Drug annotations from DrugDomain.