ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4u0mB1 - ECOD Domain | ECOD

ECOD/Domains/e4u0mB1

e4u0mB1

UID: 001349812

PDB

Range: B:276-411
PDB: 4U0M chain B(all domains)
UniProt: Q9KVG7 (all domains)
Gene: dncV

Molecule: Cyclic AMP-GMP synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DncV_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyDncV_C(102.1.3.11)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
N-[4-({[(6S)-2-amino-5-methyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-gamma-glutamyl-L-glutamic acidTLL
within 5 Å only

Pfam Families

Cyclic GMP-AMP synthase, C-terminal domain

External Links

ECOD PDB View: 4U0M RCSB PDB: 4U0M PDBe: 4U0M UniProt: Q9KVG7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.