ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3gdhA1 - ECOD Domain | ECOD

ECOD/Domains/e3gdhA1

e3gdhA1

UID: 000135295

RepresentativePDB

Range: A:634-844
PDB: 3GDH chain A(all domains)
UniProt: Q96RS0 (all domains)
Gene: TGS1

Molecule: Trimethylguanosine synthase homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_15(2003.1.5.70)

Ligands

in contact, ≤ 4 Å

7-methyl-guanosine-5'-triphosphateMGP
drugDrugBank DB02716
(R)-Propylene glycolPGR
drugDrugBank DB02159

Pfam Families

PF09445Methyltransf_15

RNA cap guanine-N2 methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3GDH RCSB PDB: 3GDH PDBe: 3GDH UniProt: Q96RS0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

S-adenosyl-L-homocysteineSAH

drugDrugBank DB01752

Shown in the structure viewer. Drug annotations from DrugDomain.