ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fdiA1 - ECOD Domain | ECOD

ECOD/Domains/e2fdiA1

e2fdiA1

UID: 000001360

RepresentativePDB

Range: A:15-214
PDB: 2FDI chain A(all domains)
UniProt: P05050 (all domains)
Gene: alkB

Molecule: Alkylated DNA repair protein alkB

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_2(10.12.1.51)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
Succinic acidSIN
drugDrugBank DB00139
FE (II) ION

Pfam Families

PF135322OG-FeII_Oxy_2

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 2FDI RCSB PDB: 2FDI PDBe: 2FDI UniProt: P05050

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.