ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3e5pA2 - ECOD Domain | ECOD

ECOD/Domains/e3e5pA2

e3e5pA2

UID: 000136047

PDB

Range: A:246-371
PDB: 3E5P chain A(all domains)
UniProt: Q837J0 (all domains)
Gene: alr

Molecule: Alanine racemase

3D Structure

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Related Domains

Browse other domains in Ala_racemase_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAla_racemase_C(1.1.7.6)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Propanoic acidPPI
drugDrugBank DB03766

+ 2 additives (HEPES, Nonaethylene glycol)

Pfam Families

PF00842Ala_racemase_C

Alanine racemase, C-terminal domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 3E5P RCSB PDB: 3E5P PDBe: 3E5P UniProt: Q837J0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE
DrugBank DB16872
Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.