ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iiqA1 - ECOD Domain | ECOD

ECOD/Domains/e3iiqA1

e3iiqA1

UID: 000136267

PDB

Range: A:79-323
PDB: 3IIQ chain A(all domains)
UniProt: P00803 (all domains)
Gene: lepB

Molecule: SIGNAL PEPTIDASE I

3D Structure

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Related Domains

Browse other domains in Peptidase_S26 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupLexA/Signal peptidase(4.11)

TT-groupLexA/Signal peptidase(4.11.1)

FFamilyPeptidase_S26(4.11.1.2)

Ligands

in contact, ≤ 4 Å

1-{2-[2-(2-Methoxyethoxy)Ethoxy]Ethoxy}-4-(1,1,3,3-Tetramethylbutyl)BenzeneTRT
drugDrugBank DB02080
AcetonitrileCCN
4-[(1,1-dioxido-1,2-thiazetidin-2-yl)carbonyl]morpholine

Pfam Families

PF10502Peptidase_S26

Signal peptidase, peptidase S26

ClanCL0299Peptidase_SF

External Links

ECOD PDB View: 3IIQ RCSB PDB: 3IIQ PDBe: 3IIQ UniProt: P00803

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

10-METHYLUNDECANOIC ACIDM12

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.